Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNVKKRPEVLSPAGTLEKLKVAIDYGADAVFVGGQAYGLRSRAGNFSMEELQEGINYAHARDAKVYVAANMVTHEGNELGAGPWFRELRD-MGLDAVIVSDPA---------LIVICATEAP-GLEIHLSTQASSTNYETFEFWKEMGLTRVVLAREVTMAELAEIRKRTDVEIEAFVHGAMCISYSGRCVLSNHMSHRDANRGGCSQSCRWKYDLYDMPFGQERQSLKGEIPEPFSMSAVDMCMIEHIPDMIENGVDSLKIEGRMKSIHYVSTVTNCYKAAVDAYMESPEAFEAIKEDLIDELWKVAQRELATGFYYHTPTENEQLFGARRKIPQYKFVGEVVSFDNAKMEATIRQRNVIMEGDRVEFYGPGFRHFECFIDGLRDAEGNKIDRAPNPMELLTITLPNPVKKGDMIRACKEGLVNLYQNDGTSKTVRA |
| 1I4N Chain:A ((112-234)) | ---------------DTVQVKLASSVGADAILIIARILT---------AEQIKEIYEAAEELGMDSLVEVHS---REDLE-------KVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGI--KDPRELKDLR-GKVNAVLVGTSIMKAENPRRFLEEMRAWSE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63119 for 743 contacts (-85.0/contact) +
2D Compatibility (PS) -12130 + (NN) -2108 + (LL) 19204
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -63553.0 ( -85.54 by residue)
QMean score : 0.481
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