Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MNTNDFDFYLPEELIAQTP--LEKRDASKLLVIDHKNKTMTDS---HFDHILDELKPGDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKR-----LRVGTKVSFGDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESLGEMPLPPYIHEK-LEDRDRYQTVYAKENG---------------SAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSE-------------FYQLSKE----------------AADTLNAVKESGGRIVAV-GTTSIRTLETIGSKFNGELKADSGWTNI----FIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFVK |
| 4D9I Chain:A ((2-397)) | SVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFITMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTDGNHGRGVAWAAQQL--GQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTD----------VKHYREVVWEGKHAVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 65199 for 2771 contacts (23.5/contact) +
2D Compatibility (PS) -33818 + (NN) -4723 + (LL) 1288
1D Compatibility (HY) 10400 + (ID) 1250
Total energy: 37096.0 ( 13.39 by residue)
QMean score : 0.070
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