Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPN--CKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDINI----YEATKHAMIDAVSHLSVAPEHLLIDAMVL---DL--------SIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEGLQKYGITP-IHRKSFEPIKSML |
| 1I39 Chain:A ((1-198)) | ----------------------------------------------------------------------MKAGIDEAGKGCVIGPLVVAGVACSDEDRLRKLGVKDSKKLSQGRREELAEEIRKI-CRTEVLKVSPENLDERMAAKTINEILKECYAEIILRL--KPEIAYVDSPDVIPERLSRELEEITGLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGDFGSGYASDPRTREVLKEWIASGRIPSCVRMRWKTVSNLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81026 for 1425 contacts (-56.9/contact) +
2D Compatibility (PS) -19129 + (NN) -5028 + (LL) 7276
1D Compatibility (HY) -4800 + (ID) 2150
Total energy: -104857.0 ( -73.58 by residue)
QMean score : 0.473
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