Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSLH---------------K-AHDYEEVLEELKSWLIDK-SSSKE------PL-VQPTL--SSFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKS-PNLMVAAFVVIADTSEEAENIAKTLDIWMLGNKD--FNEFATFPT--IEEAN----HYQLTPEQKAKIK-S-NRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 1EZW Chain:A ((4-343)) | VSFGIELLPD--------DKPTKIAHLIKVAEDNGFEYAWICDHYNN-----YSYMGVLTLAAVITSKIKLGPGITNPYTRHPLITASNIATLDWISGGRAIIGMGPGD-KA-TFDKMGLPFPCKIPIWNPEAEDEVGPATAIREVKEVIYQYLEGGPVEYEGKYVKTGTADVKARSIQGSDIPFYMGAQGPIMLKTAGEIANGVLVNAS---NPK---DFEVAVPKIEEGAKEAGRSLDEIDVAAYTCFSIDKDEDKAIEATKIVVAFIVMGSPDVVLERHGIDTEKAEQIAEAIGKGDFGTAIG-LVDEDMIEAFSIAGDPDTVVDKIEELLK-AGVTQVVVGSPIG--PDKEKAIELVGQEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140018 for 2646 contacts (-52.9/contact) +
2D Compatibility (PS) -32903 + (NN) -15266 + (LL) 1268
1D Compatibility (HY) -2800 + (ID) 2450
Total energy: -192169.0 ( -72.63 by residue)
QMean score : 0.533
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