Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFNLEQVKVFENYEIENWEEGQVTLTTKVVDSSLNYYGNAHGGYLFTLCDQVSGLVAISTGYEAVTLQSNINYLRAGRLDDLLTVIGTCVHNGRTTKVVDVHIKNQKGEMVTTAIFTMFVTGERKEK
4ZRB Chain:C ((7-129))
--FHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVISLGLDGVTLQSSINYLKAGKLDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTMFVTGQR---
General information:
TITO was launched using:
RESULT:
Template:
4ZRB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71694 for 935 contacts (-76.7/contact) +
2D Compatibility (PS) -13330 + (NN) -1813 + (LL) 504
1D Compatibility (HY) -16000 + (ID) 4150
Total energy: -106483.0 ( -113.89 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4ZRB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZRB-query.scw
PDB file :
Tito_Scwrl_4ZRB.pdb
: