Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV-PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHNDILIGIATPS------AQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYAS-SEDNSVSQVTEFTKYAQKA--GLEVLKYS---VPSTNEIKTSMSVM---TKKVDAVFVPQDNTIASAFRTVIVAANQANIPVYSSVDTM-----VEQG-SIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 3D02 Chain:A ((4-265)) | ------------------------------------EKTVVNISKVDGMPWFNRMGEGVVQAGKEFNLN---ASQ-VGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARD--AGIVVLTNESPGQPS---------ANWDVEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNKVAVYGMMIPSQAASLIKSGDITEGITYDPATAGYALAAVASTLLNGKTIEPGFELKELGKAEVDSDKHIIRFHKVLLVNKDNIDSLY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77614 for 2048 contacts (-37.9/contact) +
2D Compatibility (PS) -26419 + (NN) -13682 + (LL) 4388
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: -116427.0 ( -56.85 by residue)
QMean score : 0.470
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