Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTTCQAQLIINDVEGGYMKIDLSSIPQHKE--DKVQLLF----ESYLLGMTNLSKDSSEFVSTIVMTH
2JNG Chain:A ((4-80))
MRSE----FASGNTYALYVRDTLQPG-------------MRVRMLDDYE------------EISAG----DEGEFRQSNNGVPPVQVFWESTGRTYWVHWHMLEILGFEE--------
General information:
TITO was launched using:
RESULT:
Template:
2JNG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13095 for 473 contacts (-27.7/contact) +
2D Compatibility (PS) -7506 + (NN) 496 + (LL) 4224
1D Compatibility (HY) -5600 + (ID) 700
Total energy: -22181.0 ( -46.89 by residue)
QMean score : 0.078
(partial model without unconserved sides chains):
PDB file :
Tito_2JNG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JNG-query.scw
PDB file :
Tito_Scwrl_2JNG.pdb
: