Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKINKCLTVFSTLLLILTSLFSVAPAFADDVTTDTVTLHKIVMPQAAFDNFTEGTKGKNDSDYVGKQINDLKSYFGSTDAKEIKGAFFVFKNETGTKFITENGKEVDTLEAKDAEGGAVLSGLTKDTGF-AFNTAKL-KGTYQIVELKEKSNYDNNGSILADSKAVPVKITLPLVN--NQGV--VKDAHIYPKNTETKPQVDKNFADKDLDYTDNRKDKGVVSATVGDKKEYIVGTKILKGS-DYKKLVWTDSMTKGLTFNNNVKVTLDGKDFPVLNYKLVTDDQGFRLALNATGLAAVAAAAKDKDVEIKITYSATVNGSTTVEVPETNDVKLDYGNNPTEESEPQEGTPANQEIKVIKDWAVDGTITDVNVAVKAIFTLQEKQTDGTWVNVASHEATKPSRFEHTFTGLDNTKTYRVVERVSGYTPEYVSFKNGVVTIKNNKNSNDPTPINPSEPKVVTYGRKFVKTNQANTERLAGATFLVKKEGKYLARKAGAATAEAKAAVKTAKLALDEAVKAYNDLTKEKQEGQEGKTALATVDQKQKAYNDAFVKANYSYEWVADKKADNVVKLISNAGGQFEITGLDKGTYSLEETQAPA---------GYATLSGDVNFEVTATSYSKGATTDIAYDKGSVKKDAQQVQNKKVTIPQTGGIGTILFTIIGLSIMLGAVVVMKKRQSEEA |
| 3KPT Chain:A ((19-343)) | --------------------------------------------------------------------------------EKAMAGAVFSLFKKDGTEVK--------------------KELATDANGHIRV--QGLEYGEYYFQETKAPKGYV------IDPTKREFFVKNSGTINEDGTITSGTVVKMEVKNNEE-PTIDKKINGKLE----------ALPINPLTNYNYDIKTLIPEDIKEYKKYVVTDTLDNRLVIQGKPIVKIDGAEVNANVVEVAIEGQKVTATVKD--FTKMDG-----KKEFHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGE--------------------------------------------------------------------------------------------------------KESKPVVVIPTTGIIELTKIDSANKNKMKGAEFVLKDNNGKIVVV-----------------------------------------------------------A------------GKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTKTSYQLLKDPIDVKISENNQTVKLTIENNKS---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5267 for 2161 contacts (-2.4/contact) +
2D Compatibility (PS) -32562 + (NN) 5710 + (LL) 20416
1D Compatibility (HY) -10000 + (ID) 3150
Total energy: -24853.0 ( -11.50 by residue)
QMean score : 0.385
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