Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASLRHQLFEKLD--QKCDQMVAIRRYLHENPELSFKETKTAAYISDFYKGKDCHVQTQFGGMNGVVVDIYGDKATDKPIKHIALRADFDALPIQEE---TGLSFASKTAGVMHACGHDAHTAYLLILAESLIELKSEFSGHIRILHQPAEEVPPGGAKAMIEAGCLDGIDAVLGIHVMSTMEEGTV--QYHAGPIQTGRATFKVILQGKGGHGSMPHRANDTIVAASSFVIAAQTIVSRRVNPFDTAVVTIGSFDGKGSANVIKDSVTLEGDVRVMSEETRGVVEEEFKRILDGIAQTYGVSYQLDYQ-N-DYPV--LVNNSEVTQKVANSLKSVAIKEILDVIDCDPQTPSEDFAYYAQTIPACFFYVGAHEEGQPYYPHHHPKFQIAESSLMVSAKSMATAALAMLEEGE |
| 1XMB Chain:A ((37-426)) | --------KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYP-VAITGVIGYIG-T----GEPPFVALRADMDALPIQEGVEWEHKSK---IAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGL-SGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSF--LAGAGVFEAVITGK---------TIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN--------PDSITIGGTLRAFTGFT--QLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLL-GQ-EAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214886 for 3179 contacts (-67.6/contact) +
2D Compatibility (PS) -39744 + (NN) -21709 + (LL) 1156
1D Compatibility (HY) -22000 + (ID) 6150
Total energy: -303333.0 ( -95.42 by residue)
QMean score : 0.544
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