Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNTKTLLPYKTMPVWTAQSIPKAFLEKHNTKEGTWAKLTILSGSLVFYQLSPDGEEISRHIFDASSDIPFVDPQVWHKVSPNSPDLSCYLTFYCQKEDYFHKKYGLTRTHSEVIASAPLLSEKSNILDLGCGQGRNSLYLSLLGHQVTSVDSNGQSLVALENMALEEELP-YNIKRYDINTAAIEGHYDFILSTVVFIFLNPDCISDIILQMQSHTQIGGYNLIVSAMDTAENPCPLPFPFTFKEGQLKSYYNDWEIIKYNENLGELHRVDENGNRLKLQFATLLARKLRS |
2XVA Chain:C ((6-198)) | -----------------------------------------------------------------------------------------------RDENYFTDKYELTRTHSEVLEAVKVV-KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNEDVGELHRTD---NRIKLRFATMLARK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108370 for 1547 contacts (-70.1/contact) +
2D Compatibility (PS) -19760 + (NN) -2530 + (LL) 5764
1D Compatibility (HY) -20000 + (ID) 4950
Total energy: -149846.0 ( -96.86 by residue)
QMean score : 0.557
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