Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQVQKSFKSNTHYGTLYLVPTPIGNLDDMTFRAIRILREVDFICAEDTRNTGLLLKHFDI--TTKQISFHEHNAYDKISGLIDLLKEGRSLAQVSDAGMPSISDPGHDLVKAAIEGGIP--------------------VVSIPGASAGITALIASGLAP-QPHIFYGFLPRK-K-GQQITFFETKKDYPETQIFYESPF-----RVSDTLKHMKEIYG-DRQVVLVRELTKLYEEYQRGTISQLLGHIEKVPLKGECLIIVDGKRDTERVKDSSQQDPLVLVKEYIANGDKTNQAIKKVAKELNLNRQELYASFHDL |
2ZVB Chain:A ((2-247)) | -------------GELFLVGMGPGDLPGLTQRAREALEGAEVVIGYSTY--VKLLEEMGLLAGKEVVRKGMTEELDRAEEALERALSGQRVALVS-GGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHDTCLISLSDLLTPWPLIERRLHAAGQGDFVVVLYNPQSKRRDWQLRKSAEILLEYRPKETPAALVKSAYRKRQEVALTTLEGLREA----EAGMLTTVVIGNRQSRFYEGTFLTPRG--------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ZVB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120900 for 1761 contacts (-68.7/contact) +
2D Compatibility (PS) -23633 + (NN) -12300 + (LL) 3988
1D Compatibility (HY) -4000 + (ID) 1750
Total energy: -158595.0 ( -90.06 by residue)
QMean score : 0.431
|
|
|