Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKL---KIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPERLKKYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMKIAKQQ-G-AEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK |
| 2YJP Chain:A ((45-281)) | ---------------------------AATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVALGVVSPKN--KPI--TDMAQLKDQTLLVNKGTTADAFFTKSHPEVKLLKFDQ--NTETFDALKDGRGVALAHDNAL----LWAWAKENPNFEV-AIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLP-VYGEKVKPEALLAE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40784 for 1935 contacts (-21.1/contact) +
2D Compatibility (PS) -24990 + (NN) -5780 + (LL) 2908
1D Compatibility (HY) -7600 + (ID) 3000
Total energy: -79246.0 ( -40.95 by residue)
QMean score : 0.460
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