Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRMIPGRIRNQGIELYEQGLVSLISQEGNLLKAKVGDCQIEYSLVTEETKCSCDFFARKGYCQHLAALEHFLKNDPEGKAILSKVQVQQESQQETKKKTSFGSVFLDSLIINEDDTIKYQLSAQGEQNPYANDIWWTLKIRRLPDDRSYVIRDIKAFLNTVRKEAYYQIGKQYFETLSLIQFDETSQELIEFLWRLIPSHSSKIDLEFILPNQGRHLSLTRGFFEEGVTLMNALENFSFESDFHQFNHLYFKELEGEDHLYQFKVIVHRQSIELEIKEKDLKPLFANSYLFYRDTFYHLNLKQEKMVTAIRSLPIEGDLAKHIHFDLDDQDKLAAHLLDFKEIGLVDAPRSFSIHDFKVNFEFDINSQNEILLQMVFDYGNDLTVHNRQELEQLTFASHFKHEEKIFKLLERYGFAPHFSTSHPAYSAQELYDFYTYMLPQFKKMGTVSLSAKLESYRLIERPQIDIEAKGSLLDISFDFSDLLENDVDQALVALFDNNPYFVNKSGQLVIFDEETKKVSATLQGLRARRAKNGHIELDNIAAFQLSELFANQDNVSFSQHFYQLIEDLRHPEKFKIPGLSVSASLRDYQLTGVRWLSMLDHYGFAGILADDMGLGKTLQTISFLSTKLTR-DSRVLILSP-SSLIYNWQDEFHKFA--PDVDVAVAYGS-KIRRDEIIAERHQVIITSYSSFRQDFET--YSEGNYDYLILDEAQVMKN--AQTKIAHSLRSF-EVKNCFALSGTP--IENKLLEIWSIF------------------------QIILPGLLPGKKEFLKLNPKQVARYIKPFVM---------RRRKEEVLPELPDLIEMNYPNEMTDSQKVIYLAQLRQIQESIQHSSD----------ADLNRRK-------IEILSGITRLRQICDTPRLFMDYDGESGKLESLHQLLTQIKENGH--RALIFSQFRGMLDIAEREMVAMGLTTYKITG-STPANERHEMTRAFNAGSKDAFLISLKAGGVGLNLTGADTVVLIDLWWNPAVEMQAISRAHRLGQKENVEVYRLITRGTIEEKILEMQETKKHLVTTVLDGNETHASMSVDDIREILGVSK |
| 1WP9 Chain:A ((1-486)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVLRRDLIQPRIYQEVIYAKCKETN-----CLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNPLVIGLTASPGSTPEKIMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLREMLRDALKPLAETGLLESSSPDIPKKEVLRAGQIINEEMAKGNHDLRGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAISLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKQREQKLILDEFARGEFN-VLVATSVGEEGLDVPEVDLVVFYEP---VPSAIRSIQRRGRTGRHMPGRVIILMAKGTRDEAYYWSSR-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159548 for 3143 contacts (-50.8/contact) +
2D Compatibility (PS) -45395 + (NN) -17712 + (LL) 45780
1D Compatibility (HY) -14800 + (ID) 3900
Total energy: -195575.0 ( -62.23 by residue)
QMean score : 0.450
|
|
|