Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLNQRQERIIDIIKQFQPITGELIAEKLGVTRAALRSDLAVLSMLGIIDAKPKVGYFYLGQYHASIGTSHFEKMTVSEIMGI-PLTVHQKDSVYDVIVHIFMEDAGCAFILDDDDFLCGVVSRKDLLKTSIGGG-DLSKMPIGMVMTRMPHVTTVLENESLFAAADKLVSRKVDSLPVVRHDKQYPEKFKVIGKLSKTILASLFLEIRDY
1PVM Chain:A ((7-133))------------------------------------------------------------------------MFMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRK--PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPG------RVVGIVTLTDLSRYLSRASIT


General information:
TITO was launched using:
RESULT:

Template: 1PVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89471 for 936 contacts (-95.6/contact) +
2D Compatibility (PS) -13188 + (NN) -455 + (LL) 6412
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -106052.0 ( -113.30 by residue)
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_1PVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PVM-query.scw
PDB file : Tito_Scwrl_1PVM.pdb: