Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQNIGQTGIQATRIALGCMRMSD-LEGKQAEEVVGTALDLGINFFDHADIYGG-------GLSELRFRDAIKHLNVNRDKMIIQSKCGIREG--------YFDFSKEYILSSVDGILERLGTEYLDFLILHRPDVLV-----------------EPEEVAEAFTKLRAEGKVKHFGVSNQNRFQMELLQSYLD----EPLAVNQLQLSPAHTPMFDAGLNVNMLNKASIEHDDGIVDYCRLKRVTIQAWSPFQIDLSRGLFVNHPD-----------------------YKELNETIAKLAKNYNVSSEAIVIAWILRHPAQIQAIVGSMNPSRLKAIDKANDIALTREEWYDIYRSAGNILP |
| 1LQA Chain:A ((3-338)) | -YHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH-GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFE-----------------VGLAEVSQYEGVELLAYSC----LGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYTY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162635 for 2384 contacts (-68.2/contact) +
2D Compatibility (PS) -29173 + (NN) -13324 + (LL) 1372
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -217810.0 ( -91.36 by residue)
QMean score : 0.502
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