Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLPTEIRYRPYDEWTEEDKENIVKNVSKSPWRATYHLEAKTGLLNDPNGFSYFN--GKFHLFYQNWPFGAAHG-LKQWVHTESDDLVHFKETGIKLKPDHVNDSHGAYSGSALAI-D-------------DKLFLFYTGNVRDMKWNRDPRQIGAWMTSDGK-ITKFD-KVLISQPNDVTEHFRDPQIFNY--DNQFYAVIGAQNSKKCGFIKLYKALNNDIHHWEFVGDLDFGGTGSEYMIECPNIIFV------KGKPVLLYSPQGLDKNELDYQNIYPNTYKIGQYF-DANSSKIVEPSPIYNLDYGFEAYATQGFNTSDGRAFIVSWIGLPDI--DYPSDQFDYQGAMSLVKELSIKN---------GNLYQYPVP-----AMKNLRQHQAEFKT---Q---LQ-TNNTYELELLVPRN------DLSSFVLFA-NP----KGQGLSITIDTAKGKVIVDRSQAGQQYAT--EFGTSR--QC-NI----PKDATSVNVFIDKSIFEIFINKGEKVFTGRVFPDAEQ--SGIQLKEG--H--V---HGKYFELKY |
| 3KF3 Chain:A ((4-508)) | --------------------------DTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIP-----DNQTQDIAFSLDGGYTFTKYENNPVIDV---SSNQFRDPKVFWHEDSNQWIMVVSKSQ---EYKIQIFGS--ANLKNWVLNSNFSSG--YYGNQYECPGLIEVPIENSDKSKWVMFLAINPGSPL-----GGSINQYFVGDFDGFQFVP---DDSQTRFVDIGKDFYAFQTFSEVEHGVLGLAWASNWQYADQVPT--NPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLNLNVSPGKTHFDILINSQELNSSVDSIKIGFDSSQSSFYIDRHIPNVEFPRKQFFTDKLAAYLEPLDYDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGKYPHDIQIVTDTEEPLFELESVIIRELNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131222 for 3630 contacts (-36.1/contact) +
2D Compatibility (PS) -45048 + (NN) 929 + (LL) 2688
1D Compatibility (HY) -26400 + (ID) 4850
Total energy: -203903.0 ( -56.17 by residue)
QMean score : 0.403
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