Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSFEELLATMTLITAAEIEDK-IDSNQDFVLFIGRISCPFCHLFVPKIVEVADED--EFELFHLDSEDFDHWTANKEFRNKYDIPTVPGLMVVKNG-TI-KVKCDSKMTKEEIREFIG
2I4A Chain:A ((5-103))
-----------LAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNP------ETPNAYQVRSIPTLMLVRDGKVIDKKV-GALPK-SQLKAWVE
General information:
TITO was launched using:
RESULT:
Template:
2I4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65072 for 654 contacts (-99.5/contact) +
2D Compatibility (PS) -9792 + (NN) -1948 + (LL) 1868
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -82144.0 ( -125.60 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_2I4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I4A-query.scw
PDB file :
Tito_Scwrl_2I4A.pdb
: