Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRIWYLIIIITVILGGLAMKNLFATTEASSRKQEQDRVVKYIKQHVELTNGDQIKKVEFIDFQKNEMTGTWGISTKINE----QFSISFSEDRIGGKLRALGYQPNEIGFSKDINSNNQNVNDIEVIYMKEE
4I86 Chain:A ((5-106))
--------------------------------QKRNSHRIPATIPVEVANADGSIIVTGVTEDLSMGGAAVKMSWPAKLSGPTPVYIRTVLDGEELILPARIIRAGNGRGIFIWTIDNLQQEFSVIRLVFGLEH
General information:
TITO was launched using:
RESULT:
Template:
4I86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -390 for 681 contacts (-0.6/contact) +
2D Compatibility (PS) -10277 + (NN) -1937 + (LL) 3420
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -12684.0 ( -18.63 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_4I86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I86-query.scw
PDB file :
Tito_Scwrl_4I86.pdb
: