Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVKKHHLAYGAITLVALFSCILAVMVIFKSSQVTTESLSKADKVRVAKKSKMTKATSKSKVEDVKQAPKPSQASNEAPKSSSQSTEANSQQQVTASEEAAVEQAVVTENTPATSQAQQAYAVTETTYRPAQHQTSGQVLSNGNTAGAIGSAAAAQMAAATGVPQSTWEHIIARESNGNPNVANAS-----GASGLFQTMPGWGSTAT--------------------VQDQVNSAIKAYR-AQGLSAWGY |
| 2NWD Chain:X ((18-110)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------DGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16262 for 412 contacts (-39.5/contact) +
2D Compatibility (PS) -7089 + (NN) -2305 + (LL) 11916
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -17390.0 ( -42.21 by residue)
QMean score : 0.587
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