Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNN---KTVARRSLVAQMLVTANAKYPKVQEFREKLASLYGASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTEKKNLIQYLEADI-EDNFYSSDLALKSLFYNNKTLRLPKYGTASLVESENSFTAYQEFQKMLKEDQLDIFVVGDFDDYRMIQAF-NRMAFEPRHKVLA-FDYTQTY-ENITRSQVEDKDVNQSIMQLAYHLPITY---KDEDYFALIVFNGLFGAFAHSLLFTEIREKQGLAYTIGSQFDS----FTGLFTIYAGIDK-ENRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVLASDNPKVIVDHIYHEHYLD-QFHTSALFIDKVDDVTKSDIVSVATKLKLQAFYFLEGN |
| 3AMI Chain:A ((36-437)) | TTLPNGLKVVVREDHRAPTLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVG-PGEFSKRVAAM-GGRDNAFTTRD----YTAYYQQVPSS--------RLSDVMGLEADRMANL-----VVDDELFKKEIQVIAEERRWRTDDKPRSKAYEALMAASYVAHPYRVPVIGWMNDIQNMTAQDVRDWYKRWYGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQGEPQQAGVRRVTV-KAPAELPYLALAWHVPAIVDLDKSRDAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLSRGQQGLFILEGVPSKGVTIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQDSLMGQATQIGGLEVLGLSWRDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180255 for 3083 contacts (-58.5/contact) +
2D Compatibility (PS) -40749 + (NN) -6294 + (LL) 1792
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -235406.0 ( -76.36 by residue)
QMean score : 0.489
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