Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASSGKP-YPEELSSEQWILVMQKLAAH-GVADITLTGGEAKLIKG--FKELVVVASSLFTNVNVFSNGL--------NWRDEEVELLSHLGNVSVQISIDGMDNTHDQLRGRKGGFKESMNTIKKLSEANIPVIVAMTINES---NADEVSDVVEQCANAGAFIFRAGKTLSVGRATEGFKALDIDFEEMVQIQLREARHKWGDRLNIIDWEHEESSFTTDFCTPGYLAWYIRADGYVTPCQLEDLPLGHILEDSMADIGSPARLLQLKCEAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
2A5H Chain:A ((111-294)) | ------------------------------------------------------------------------------------------------------HRYPDRVLLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIP-HVEIVRIGSRTPVVLPQRITPELVNMLKKYHPVWLNTHFNHPNEI----------TEESTRACQLLADAGVPLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDL-------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -89617 for 1216 contacts (-73.7/contact) +
2D Compatibility (PS) -18472 + (NN) -10610 + (LL) 16344
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -111655.0 ( -91.82 by residue)
QMean score : 0.483
|
|
|