Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDEFDLIHSITPRTIHHSSVDVGIGDDAAL--YTAKHGVQEIVCVDTMVEDVHFKLHYSSPEDIGYKALAVNISDIAAMGGIPKFYLVSLAVPSKWTESEIKAMYEGMNELAKLYHMDLIGGDTVSTADKLVVTVTVIGEIEKGQACLRSLAKPNDIVFVTGEIGSSAAGLSLLLEETNPQNSSVETDYFIHRHKRPEPRVSVGRLCSIFKRAALNDVSDGLASELNEIAEASCVSIEIVESMLPIHSDLP----KLHPNWKEWALFGGEDFELTGTVSNEEWEVLKQECAALHLPITKIGYVREKTKSKVILKTDQTSMILEKKGYNHFK
3C9T Chain:B ((42-342))LGEFGLIDLI--KKTLESKV---IGDDTAPVEYCSK---KLLLTTDVLNEGVHFLRSYI-PEAVGWKAISVNVSDVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEFYKCEVVGGN-ISKSEKIGISVFLVGETERFVG--RDGARLGDSVFVSGTLGDSRAGLELLLMEKEEYEPFELA--LIQRHLRPTARIDYVKHIQKYANASM-DISDGLVADANHLAQRSGVKIEILSEKLPLSNELKMYCEKYGKNPIEYALFGGEDYQLLFTHPKERWNPF--------LDMTEIGRVEEGEGVFVDGKK------VEPKGWKHF-


General information:
TITO was launched using:
RESULT:

Template: 3C9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1673 -113686 -67.95 -385.37
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -67.95
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.311

(partial model without unconserved sides chains):
PDB file : Tito_3C9T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C9T-query.scw
PDB file : Tito_Scwrl_3C9T.pdb: