Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKKWQWLVYGWKLIILTLLTAAVFSYAMFQGGFVSWFLFYAFLPFVLYAGLLALYPLRSFQASRQMDKTQLHAGDRLGVTVTLRRKLPFPLMYMVIEDCLPEGIESLNRDGAAAKRLVFPWFKRSMTMSYELARVPRGEHHFHSVRVRTGDVLGLIEKTAFFELDDTLFVYPFYQRFSYQVNERHQEDGVSGSSPIHQHHSSVAASVRNYQPGDRFAALDWKTSARRSQLMTKEFEPSRSKNLFLLMDRFSSDAFEEVVSVTASILHSVLKNGAGAGLASIGKEKNIFPIQEGDQHFKHMLRHLAIAHCDA-ADPISRYAREELGKPSVRQADQVVVTGQLTEDML-HLAEIGG-GRVTVILAKEKDAELSQAENVMIERMMKRQIRVRIMRGGRVSRVV
2L82 Chain:A ((16-143))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEIVREIKRQGVRVVLLYSDQDEKR-----RRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVV-IVTTD-DKEWIKDFIEEAKERGVEVFVVYNNKD--DDRRKEAQQEFRSDGVDVRTVSDKEELIE-


General information:
TITO was launched using:
RESULT:

Template: 2L82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 465 -44800 -96.34 -358.40
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -96.34
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.324

(partial model without unconserved sides chains):
PDB file : Tito_2L82.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2L82-query.scw
PDB file : Tito_Scwrl_2L82.pdb: