Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKWSELSIHTTHEAVEPISNILHEAGASGVVIEDPLDLIKERENVYGEIYQLDPNDYPDEGVIVKAYLPVNSFLGETVDGIKETINNLLLYNIDLGRNHITISEVNEEEWATAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERFVQKGDKVIDVGTGSGILSIAAAMLEAESVHAYDLDPVAVESARLNLKLNKVSDIAQVKQNNLLDGIE-GEHDVIVANILAEVILRFTSQAYSLLKEGGHFITSGIIGHKKQEVKEALEQAGFTIVEILSMEDWVSIIAKK
3CJT Chain:I ((53-248))-------------------------------------------------------------------------------------------------------EVGDEDWLEAWRRDLKPA-LAPPFVVLAPWHTW---EGAEIPLVIEPGMAFGTGHAETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKAL-GVDIDPMVLPQAEANAKRNGVRP--RFLEGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWV------


General information:
TITO was launched using:
RESULT:

Template: 3CJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 1032 -72255 -70.01 -370.54
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain I : 0.68

3D Compatibility (PKB) : -70.01
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_3CJT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CJT-query.scw
PDB file : Tito_Scwrl_3CJT.pdb: