Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQTLDHFLKSWEFEADATQKLLNSLTDESLKQEITSQNWTLGRIAWHTVAAIGIIT----SNT---DLTFQAPAEDYPVPTSAQFIADSYHQASNAFVQALKTQWTDHTLQERINFI-GQQMPNGSLLMFLIQHQNHHRGQMTVLMRQAGLTVPGIYGPAKEEWAKFGLEAPKM
2YQY Chain:A ((9-166))---TWDEALKRLEASRKALLALLREADPAWLSAPLREGAWTPLMVAEHVALVEDSTARVLRRLRRLA--------------LSLEEVLALLDRARAFLLEEVAKA-D-PQNPATFPHPFFGELNPLGWLRAAAYHEAHHLKALQAS-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 400 -27257 -68.14 -229.05
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -68.14
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_2YQY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YQY-query.scw
PDB file : Tito_Scwrl_2YQY.pdb: