Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEYTYLGRTGLRVSRLCLGTMNFGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGVVAWSPLAGGLLGGKALKSNAGTRTAKRADLIEKHRLQLEKFSDLCKELGEKEANVALAWVLANPVLTAPIIGPRTVEQLRDTIKAVEISLDKEILRMLNDIFPGPGGETPEAYAW
2BP1 Chain:B ((43-237))-----------------LGTMEMGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQ----SETILGGLGLGLG---CRVKIATK-----ANPWDG----KSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGK-----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2BP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 932 -79197 -84.97 -412.48
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -84.97
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_2BP1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BP1-query.scw
PDB file : Tito_Scwrl_2BP1.pdb: