Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKQLKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVTEIEDFEYIVTSSNLEALILEMNLIKKHDPKYNVMLKDDKTYPFIKLTHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRKCSKLPDRVCLYYHLGQCLAPCVKDISEETNRELVESITRFLRGGYNEVKKELEEKMHEAAENLEFERAKELRDQIAHIESTMEKQKMTMNDLVDRDVFAYAYDKGWMCVQVFFIRQGKLIERDVSMFPLYQEADEEFLTFIGQFYSKNNHFLPKEILVPDSIDQSMIEQLLETNVHQPKKGPKKELLMLAHKNAKIALKEKFSLIERDEERSIGAVQKLGEALNIYT-PHRIEAFDNSNIQGTNPVSAMIVFIDGKPYKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLIIIDGGKGQINAARDVIENELGLDIPIAGLAKDEKHRTSNLLIGDPLEVAYLERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSAFQSVLDDIPGIGEKRKKMLLKHFGSVKKMKEASLEDIKKAGVPAAAAQLLYDKLQK
2NRV Chain:B ((8-216))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALEELMKLLNMKDFPYRIEGIDISHLQGKYTVASLVVFEDGFPKKGDYRRYKIEQ-DHPDDYESIRTVVKRRYSK-----HPLPNLLFVDGGIGQVNAAIEALK-EIGKDCPVVGLAKKEE-----TVVFENREI-HLPHDHPVLRLLVQIRDETHRFAVSYHRKRREKESLRSVLD-VPGIGPIRKKKLIEHFGSLENIRSASLEEIARVIGSTEIARRVL-----


General information:
TITO was launched using:
RESULT:

Template: 2NRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 935 -6583 -7.04 -31.80
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -7.04
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_2NRV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NRV-query.scw
PDB file : Tito_Scwrl_2NRV.pdb: