Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSQKPWLAEYPNDIPHELPLPNKT-LQSILTDSAARFPDKTAISFY---------GKKLTFHDILTDALKLAAFLQCNGLQKGDRVAVMLPNCPQTVISYYGVLFAGGIVV-QTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTLSIVDQILITSVKDYLPFPKNILYPLTQKQKVHIDFDKTANIHTFASCMKQEKTELLTIPKIDPEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWMYDVKEGAEKVLGI--VPFFHVYGLTAVMNYSIKLGFEMILL-PKFDPLETLKIIDK--HKP----TLFPGAPTIYIGLLHH-----PELQHYDLSSIKSCLSGSAALPVEVKQKFEKVTGGK------LVEGYGLSEAS------------PVTHA--------NFIWGKNKPG------SIGCPWPSTDAAIYSEETGELAAPYEHGEIIVKGPQVMKGYWNKPEETAAVLRD------------------GWLFTGDMGYMDEEGFFYIADRKKDIIIAGGYNIYPREVEEALYEH-EAIQ--EIVVAGVPDSYRGETVKA-----------------FVVLKKGAKADTEELDAFARSRLAPYKVPKAYEFRK-------ELPKTAVGKILRRRLLEEETEN----HHIK
5EY9 Chain:A ((3-626))--------YHNPFIVNGKIRFPENTNLVRHVEKWARVRGDKLAYRFLDFSTERDGVERDILWSEFSARNRAVGARLQQVT-QPGDRIAILCPQNLDYLISFFGALYSGRIAVPLFDPAEHVGRLHAVLDDCTPSTILT-----------------------TTDSAEGVRKFIRSRSAKERPRVIAVDAV-------------PTEVASTWQQPNELTTAYLQYT-----VPSGVQITHLNLPTNVLQVLNAL----EGQEGDRGVSWLPFFHDMGLITVLLASVL-GHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAMRGVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFKAFEPYGLRETAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDELNKQRFVEVAADAPNAVAQVSAGKVGVDEWAVIVDTETASELPDGQIGEIWLHGNNLGIGYWGKEEESAQTFRNILKSRVPESHAEGAPDDGLWVRTGDYGTYFK-GHLYIAGRIKDLVIIDGRNHYPQDLEYTAQESTKALRVGYVAAFSVPANQLPQKVFDDPHAGLSFDPEDTSEQLVIVGERAAGTHKLEYQPIADDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRTAYIDGSLRSTVFA


General information:
TITO was launched using:
RESULT:

Template: 5EY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2986 777 0.26 1.54
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 0.26
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_5EY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EY9-query.scw
PDB file : Tito_Scwrl_5EY9.pdb: