Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYDHILIRFGEISTKGKNRKSFIERLKQNIRLVLKDYPNLKYFSNRDRMTITLNGEDPEALFPHLKQVFGIQSFSLAIKCDSRLDDIKATALKAIKDQYKPGDTFKVATKRAYKQFELDTNQMNAEIGGHILRNTEGLTVDVRNPDIPLRIEIREEATFLTIRDEKGAGGLPVGSAGKAMLMLSGGFDSPVAGFYAMKR-GLSVEAVHFFSPPYTSERAKQKVMDLAKCLSRFGGSMT-LHIVPFTKTQE-LI----QK-Q----IPENYTMTATRRLMLQIADRIREKRNGLAIITGESLGQVASQTLESMYAINAVTSTPILRPLIAMD---KTEIIEKSREIGTYETSIQPFEDCCTIFTPPSPKTRPKKEKIEHFESFVDFEPYIQEAVDNIETMTLYSEQEANDKFAELF
1KOR Chain:A ((2-180))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQG---EEVEEAREKALRT-----GASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKG-NDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVP-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1KOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 689 -6750 -9.80 -45.30
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -9.80
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_1KOR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KOR-query.scw
PDB file : Tito_Scwrl_1KOR.pdb: