Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVT-DINKAFIQTLFPG---AVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQL--ALDNKVVAFGYSQSATIINNYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILHLIPPPVFT |
| 3QPD Chain:A ((36-200)) | ----------------------------------------------------------------------------------------------------------------------------------------PCKPITFIFARASTEPGLLGISTGPAVC-NRLKLARSGDVACQGVGPRYTADLPSN-----ALPEGTSQ-AAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSAD--VQDKIKGVVLFGYTRNAQER-----GQ--IA--N------FP---KDKVKVYCAVGDLVCLGTLI-------------VAPPHFSYLSD----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38833 for 1334 contacts (-29.1/contact) +
2D Compatibility (PS) -17492 + (NN) -16294 + (LL) 19088
1D Compatibility (HY) 3200 + (ID) 850
Total energy: -51181.0 ( -38.37 by residue)
QMean score : 0.322
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