Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTAAVLRARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGYAAGGGPVGVGEAVGRSMRFSLVSVQVVVLFAALALYGVDPNFNLTV |
1PGY Chain:A ((1-47)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALVDEVKDMEIARLMSL-GLSIEEATEFYENDVTYERYLEILKSKQKE--------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -20431 for 245 contacts (-83.4/contact) +
2D Compatibility (PS) -4978 + (NN) -474 + (LL) 20160
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -8623.0 ( -35.20 by residue)
QMean score : 0.090
|
|
|