Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYLQFRGEFTPKTQLTMLSARAGLVMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVFGGKYVSLTTPKNPTKRRITPKDVIDVRSVTTEINTLFQTLTSIAEKVD-PVKLNLTLSAAAEALTGLGDKFGESIVNANTVLDDLNSRMPQSRHDIQQLAALGDVYADAAPDLFDFLDSSVTTARTINAQQAELDSALLAAAGFGNTTADVFDRGGPYLQRGVADLVPTATLLDTYSPELFCTIRNFYDA--DPLAKAASGGGNGYSLRTNSEILSGIGISLLSPLALATNGAAIGIGLVAGLIAPPLAVAANLAGALPGIVGGAPNPYTYPENLPRVNAR-GGPGGAPGCWQPITRDLWPAPYLVMDTGASLAPYNHMEVGSPYA-VEYVWGRQVGDNTINP-- |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIE--------------DPIEQVQVLTKIVVTIYQHD----------GPMEWIPSIMEDAMYIAKKLRD------------PANKAVAYSIIASTLAIMEY--------------------EEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAG-YPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTL-----------------------PSNEAMDFYKMAFDIFDK--LHVNQRAAIVEKKIELAKT-----------VYDVGLPQIRAALLKGKNHYALAIIKKKYSG-VMRLIGELEVALWMKRVN----------NMEYLDVVDKAFE-CCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69256 for 2784 contacts (-24.9/contact) +
2D Compatibility (PS) -35302 + (NN) 9532 + (LL) 6684
1D Compatibility (HY) -12400 + (ID) 3150
Total energy: -103892.0 ( -37.32 by residue)
QMean score : 0.222
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