Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKITGTVVKLGIVSVVLLFFT---------VMIIVIFGQMRFDRTNGYTAEFSNVSGLRQGQFV-----RASGVEIGKVKALHLVDGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEGKGANDLLPPGGLIPLSRT----SPALDLDALIGGFKPVFRALDPAKVNNIANALITVFQGQGGTINDILDQTAQLTSQIAERDQAIGEVVKNLNIVLDTTVKHRKEFDETVNNLEN--LITGLRNHSDQLAGGLAHISNGAGTVADLLAENRTLVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWNGFQAGGPVRTVKLFSQPTGRCTPQ |
| 19HC Chain:A ((1-292)) | AALEPT--DSGAPSAIVMFPVGEKPNPKGAAMKPVVFNHLIHEKKIADCETCHHTGDPVSCSTCHTVEGKAEGDYITLDRAMHATDIAARAK-GNTPTSCVSCHQSETKE---------------RRECAGCHAITTPKDDEAWCATCHDITPSMTPSEMQKGIA---GTLLPGDNEALAAETVLAEA-----------TVAPVSPMLAPYKVVIDALADKYE---PSDFTHRRHLTSLMESIKDDKLAQAFHDKPEILCATCHH---------------RSPLSLTPPKCGSCHTKEIDA--------------------ADPGRPNLMAAYHLECMGCHKGMAVARPRDT----DCTTCHKAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 19HC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52311 for 1754 contacts (-29.8/contact) +
2D Compatibility (PS) -28065 + (NN) -5443 + (LL) 5244
1D Compatibility (HY) -800 + (ID) 2250
Total energy: -83625.0 ( -47.68 by residue)
QMean score : 0.097
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