Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAA------------EPIPGAQRVAWMRELFPFDR-VVHLANENP-QRPWEHPDFWDIWKASLQGVLAT---RPDFVFGAEPYNA-DFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGG----SLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRDLA-RRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVIT-GGWEERLSVSLRAVEELVRARR |
| 1LW7 Chain:A ((2-347)) | KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHLVEDGIPSY-PNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTE---------QKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LW7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166638 for 2405 contacts (-69.3/contact) +
2D Compatibility (PS) -35250 + (NN) -22963 + (LL) 492
1D Compatibility (HY) -17200 + (ID) 3850
Total energy: -245409.0 ( -102.04 by residue)
QMean score : 0.457
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