Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTRSARIVVVSSRAAAGVYTDDCGPIIAGWLEQHGFSSVQPQVVADGNPVGEALHD--AVNAGVDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGRTLIINLPGSPGGVRDGLGVLADVLDHALEQIAGGDHPR
2IS8 Chain:C ((6-155))
-------ILTVSDKGFRGERQDTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRDRTPEATRELLDREVPGLAELMRLVGLRKTPMAALSRGVAGVRGRTLILNLPGSPKGARESLEAVLPVLPHALSLVTG-----
General information:
TITO was launched using:
RESULT:
Template:
2IS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100235 for 1218 contacts (-82.3/contact) +
2D Compatibility (PS) -15620 + (NN) -3226 + (LL) 304
1D Compatibility (HY) -8000 + (ID) 3200
Total energy: -129977.0 ( -106.71 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2IS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IS8-query.scw
PDB file :
Tito_Scwrl_2IS8.pdb
: