Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAG------IGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALS----AAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL |
| 1LSG Chain:A ((13-116)) | ------------------------------------------------------------------------------------------MKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR-----------------------------------NTDGSTDYGILQINSRWWCNDGRTP--GSRNLCNIPCSALLSSDITASVNCAKKI---VSDGNGMNAWVAWRNRC------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30535 for 713 contacts (-42.8/contact) +
2D Compatibility (PS) -9243 + (NN) -696 + (LL) 8168
1D Compatibility (HY) 1200 + (ID) 800
Total energy: -31906.0 ( -44.75 by residue)
QMean score : 0.126
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