Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIGMICPYSFD---VPGGVQSHVLQLAEVMRTRGHLVSVLAPASP-HAAL-----P-DYFVSGGRAVPIPYNGSVARLRFGPATHRKVKKWL--AHGDFDVLHLHEPNAPSLSMLALNIAEGPIVATFHTSTTKSLT----LTVF-QGILRPMHEKIVGRIAVSDLARRWQMEALGS---DAVEIPNGVDVDSFASAARL-------DGYPRQGKTVLFLGRYDEPRKGMAVLLDALPKVVQRF--PDVQLLIVGHGDADQLRGQAG--RLAAHLRFLGQVDDAGKASAMRSADVYCAPNTGGESFGIVLVEAMAAGTAVVASDLDAFRRVLRDGEVGHLVPV-DPPDLQAAALADGLIAVLENDVLRERYVAAGNAAVRRYDWSVVASQIMRVYETVAGSGAKVQVAS |
| 3C48 Chain:A ((21-431)) | MRVAMISMHTSPLQQ---GMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAG-PYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPG---TERSRRELGIPLHTKVVAFVGRL-QPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS-DTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFN-ESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHA-----WADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236732 for 3057 contacts (-77.4/contact) +
2D Compatibility (PS) -39101 + (NN) -22485 + (LL) 1736
1D Compatibility (HY) -11600 + (ID) 4000
Total energy: -312182.0 ( -102.12 by residue)
QMean score : 0.486
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