Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHHYRLPLRRTPPGGSDYALALLLALGGALPASAADAPAPAEEAPPLAGSAPAKADTALGKVTVTARRREEDSQKVPTPITVLGGETLEAQRISRVQDLQQVLPSVNVAYIHARQSSVAVRGIGNNPASDGLEGSAGIYLDNVYLGRPG------MAVFDLLDIEQLELLRGPQGTLFGKNTTAGVLNISTRAPTFTAERTVEVSGGQDGYFQGRGTVSGPLG--ETLAGRLSAYRTRDDGYIKNIHDDNYLNGGERQGARGQLLFEPNEDFSLRWIADYNEEDSSNGSMVVYGGAERFWQRAALVGASPLRDPQRRKVN-INGRQHVSVHQGGSSLEANWNLAGGYRLTSISAYRYWHFTPAN---D--EQLNV--SAINDTGVEVHDRQFSQEIRLASP---TGGAFDYVVGAYAFRQNLGNKTFTSYGPLADL-YLLG--ANLGALND-TYSKANGKIETDSFALFAQGTWHLTERLDFTAGLRGTYEEKNAKVERFAPLGGAAVGGVGAAVRNGQLGAYDSGDLSQYNFAPSALLSLSYQFSDDLLGYASLSHGEKSGGVNLAVGSAPSAGADSLLVGPERANDAELGLKSTLFDRRLLLNANLFWTGIHGYQATTLYQAPGSTQ-LVQVLANAGSVRSRGLEFEATALPLRGLTLNFNGSYNDVTYLSFKDAPCPAEVSTRPGAPSSCDLTGQRVVGASKWIANLNGEYQWRLDDRFQPYVSASYAYRSAAEGTLDNS-----DLSKIDGYALVNLAAGLRSDLGDGQLDTSVWLKNAFDKDYYLSAFASINGSYTASVGQPRTLGVSLRYDF |
| 2W16 Chain:A ((106-772)) | ------------------------------------------------------------PGTIATATRLVLTPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPGITVSAYDTDRNNYYARGFSIN----------NFQYDGIPSTARNVGYSAGNTLSDMAIYDRVEVLKGATGLLTGAGSLGATINLIRKKPTHEFKGHVELGAGSWDNYRSELDVSGPLTESGNVRGRAVAAYQDKHSFMDHY-------ERKTSVYYGILEFDLNPDTMLTVGADYQDNDPKG-SGWSG-SFPLFDSQ-GNR--NDVS----RSFNNGAKWSSWEQYTRTVFANLEHNFANGWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFLGREHELVVGTSASFSHWEGKSYWNLRNYDNTTDDFINWDGDIGKPDWGTPSQYIDDKTRQLGSYMTARFNVTDDLNLFLGGRVVDYRVTGLN-----------------------------PTIRESGRFIPYVGAVYDLNDTYSVYASYTDIFMPQDSWYR-------DSSNKLLEPDEGQNYEIGIKGEYLDGRLNTSLAYFEIHEENRAEEDALYNSKPTNPAITYAYKGIKAKTKGYEAEISGELAPGWQVQAGYTHKIIRDDS----------------------GKKVSTWEPQDQLSLYTSYKFKGA-LDKLTVGGGARWQGKSWQMVYNNPRSRWEKFSQEDYWLVDLMARYQIT---DKLSASVNVNNVFDKTYYTNIGF----YTSASYGDPRNLMFSTRWDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 72542 for 5326 contacts (13.6/contact) +
2D Compatibility (PS) -63992 + (NN) 6726 + (LL) 3604
1D Compatibility (HY) -7600 + (ID) 5850
Total energy: 5430.0 ( 1.02 by residue)
QMean score : 0.078
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