Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIISDGIYNLIIFVLAVYVGYHVVWNVTPALHTPLMAVTNAIS-AIVIVGAMLAAALTVTPLGKAMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKAGGH
1IC2 Chain:A ((1-79))
MD------------------------AIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADKKAT
General information:
TITO was launched using:
RESULT:
Template:
1IC2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11155 for 301 contacts (-37.1/contact) +
2D Compatibility (PS) -8320 + (NN) -5356 + (LL) 2556
1D Compatibility (HY) 4000 + (ID) 550
Total energy: -18825.0 ( -62.54 by residue)
QMean score : -0.069
(partial model without unconserved sides chains):
PDB file :
Tito_1IC2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IC2-query.scw
PDB file :
Tito_Scwrl_1IC2.pdb
: