Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISMTEAAAKHVQRSLEGRGKGEGIRLGVRTTGCSGLAYVLEFVDELAAEDLVFESHGVKVIIDPKSLVYLDGTELDFTREGLNEGFKFNNPNVRGECGCGESFNV
2D2A Chain:A ((16-122))
QGLTLTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGCGESFGV
General information:
TITO was launched using:
RESULT:
Template:
2D2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39577 for 691 contacts (-57.3/contact) +
2D Compatibility (PS) -11763 + (NN) -6472 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2500
Total energy: -70312.0 ( -101.75 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2D2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D2A-query.scw
PDB file :
Tito_Scwrl_2D2A.pdb
: