Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
3N84 Chain:D ((3-103))
-----------------------------------------------------EMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQV---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N84.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63324 for 665 contacts (-95.2/contact) +
2D Compatibility (PS) -10891 + (NN) -6756 + (LL) 5496
1D Compatibility (HY) -14000 + (ID) 5050
Total energy: -94525.0 ( -142.14 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_3N84.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N84-query.scw
PDB file :
Tito_Scwrl_3N84.pdb
: