Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNLIISVEGDLVVIRSESTFKNTEISFKLGVEFDEITPDDRKVKSIITLDGGVLVHVQKWDGKSTTIKKRRDGDKLVVECVMKGVTSTRVYERA
3FR2 Chain:A ((1-131))
-CDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA
General information:
TITO was launched using:
RESULT:
Template:
3FR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40698 for 953 contacts (-42.7/contact) +
2D Compatibility (PS) -14978 + (NN) -6308 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 5800
Total energy: -84376.0 ( -88.54 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3FR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FR2-query.scw
PDB file :
Tito_Scwrl_3FR2.pdb
: