Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
5P21 Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
5P21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97636 for 1335 contacts (-73.1/contact) +
2D Compatibility (PS) -18309 + (NN) -5491 + (LL) 488
1D Compatibility (HY) -23200 + (ID) 8300
Total energy: -152448.0 ( -114.19 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_5P21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5P21-query.scw
PDB file :
Tito_Scwrl_5P21.pdb
: