Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSDRARKGGGGPKDFGAGLKYNSRHEKVNGLEEGVEFLPVNNVKKVEKHGPGRWVVLAAVLIGLLLVLLGIGFLVWHLQYRDVRVQKVFNGYMRITNENFVDAYENSNSTEFVSLASKVKDALKLLYSGVPFLGPYHKESAVTAFSEGSVIAYYWSEFSIPQHLVEEAERVMAEERVVMLPPRARSLKSFVVTSVVAFPTDSKTVQRTQDNSCSFGLHARGVELMRFTTPGFPDSPYPAHARCQWALRGDADSVLSLTFRSFDLASCDERGSDLVTVYNTLSPMEPHALVQLCGTYPPSYNLTFHSSQNVLLITLITNTERRHPGFEATFFQLPRMSSCGGRLRKAQGTFNSPYYPGHYPPNIDCTWNIEVPNNQHVKVRFKFFYLLEPGVPAGTCPKDYVEINGEKYCGERSQFVVTSNSNKITVRFHSDQSYTDTGFLAEYLSYDSSDPCPGQFTCRTGRCIRKELRCDGWADCTDHSDELNCSCDAGHQFTCKNKFCKPLFWVCDSVNDCGDNSDEQGCSCPAQTFRCSNGKCLSKSQQCNGKDDCGDGSDEASCPKVNVVTCTKHTYRCLNGLCLSKGNPECDGKEDCSDGSDEKDCDCGLRSFTRQARVVGGTDADEGEWPWQVSLHALGQG----HICGASLISPNWLVSAAHCYI--DDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFT---FDYDIALLELEK-PAEYSSMVRPICLPD--ASHVFPAGKAIWVTGWGHTQYGGTGAL-------ILQKGEIRVINQTTCENLL----------PQQITPRMMCVGFLSGG-VDSCQGDSGGPLS-SVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENTGV- |
| 1A0L Chain:A ((1-244)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGGQEAPRSKWPWQVSLRVHG--PYWMHFCGGSLIHPQWVLTAAHCVGPD-----VKDLAA-LRVQLREQHLYY----QDQLLPVSRIIVHPQFYT--AQI-GADIALLELE-EPVKVSSHVHTVTLPPAS--ETFPPGMPCWVTGWGDVDND-----ERLPPPFPLKQVKVPIMENHICDA-KYHLGAYTGDDVRIVRDDMLCAGNT---RRDSCQGDSGGPLVCKVN--GTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154742 for 1766 contacts (-87.6/contact) +
2D Compatibility (PS) -23259 + (NN) -14171 + (LL) 29520
1D Compatibility (HY) -16000 + (ID) 4700
Total energy: -183352.0 ( -103.82 by residue)
QMean score : 0.186
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