Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDPFAVKDGLLILE
2OKL Chain:A ((1-184))
-----------HMLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTDAD--GT------LYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPFAAPDDSKPLE
General information:
TITO was launched using:
RESULT:
Template:
2OKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86136 for 1448 contacts (-59.5/contact) +
2D Compatibility (PS) -18843 + (NN) -823 + (LL) 1920
1D Compatibility (HY) -15200 + (ID) 4850
Total energy: -123932.0 ( -85.59 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2OKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OKL-query.scw
PDB file :
Tito_Scwrl_2OKL.pdb
: