Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1EJH Chain:A ((5-190))
-------------------------------EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTAT------KNRFVV
General information:
TITO was launched using:
RESULT:
Template:
1EJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87773 for 1343 contacts (-65.4/contact) +
2D Compatibility (PS) -19188 + (NN) -8875 + (LL) 988
1D Compatibility (HY) -26400 + (ID) 8950
Total energy: -150198.0 ( -111.84 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_1EJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJH-query.scw
PDB file :
Tito_Scwrl_1EJH.pdb
: