Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APEDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFINAIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYLITYQIMKPEAPS
3UH2 Chain:B ((9-211))
APEDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFINAIIHKGFDERHAY--GMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTIKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYLITYQIMKPE---
General information:
TITO was launched using:
RESULT:
Template:
3UH2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63059 for 1574 contacts (-40.1/contact) +
2D Compatibility (PS) -22054 + (NN) -10449 + (LL) 8
1D Compatibility (HY) -26400 + (ID) 10000
Total energy: -131954.0 ( -83.83 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3UH2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UH2-query.scw
PDB file :
Tito_Scwrl_3UH2.pdb
: