Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGANLEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFRPLFRWQLCPGWPVLAQLAVGSALFS-IVVPVLAPGL---GSTRSSALCSLGYCVWYGSAFAQALLLGCHA-------SLGHRLGAGQVPGLTLGLTVGIWGVAALLTLPVTLASGAS-----GGLCTLIYSTELKALQATHTVACLAIFVLLPLGLFGA---KGLKKAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMGPGPWMNILWAWFIFWWPHGVVLGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWSSHLDTLGSKS |
2RH1 Chain:A ((40-477)) | ---------------------------------------------------------VVGMGIVMSLIVLAIVFGNVLVITAIAKF--ERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNL-----------IRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227887 for 1851 contacts (-123.1/contact) +
2D Compatibility (PS) -24811 + (NN) -3991 + (LL) 3652
1D Compatibility (HY) -8400 + (ID) 1500
Total energy: -262937.0 ( -142.05 by residue)
QMean score : 0.224
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