Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALSSENCSFQYQLRQTNQPLDVNYLLFLIILGKILLNILTLGMRRK-NTCQNFMEYFCISLAFVDLLLLVN-ISIILYFRDFVLLSIRFTKYHICLFT---QIISFTYGFLHYPVFLTACIDYCLNFSKTTKLSFKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKAQNAYSRHCPFYVS--IQSYWL-SFFMVMILFVAFITCWEEVTTLVQAIRITSYMNETIL--------------------------------------------------------------------------------------------------------------------------------Y--------------FPFSSHSSYTVRSKK--IFLSKLIVCFLSTWLPFVLLQVIIVLLKV--QIPAYIEMNIPWLYFVNSFLIATVYWFNCHKLNLKDIGLPLDPFVNWKCCFIPLTIPNLEQIEKPISIMIC |
| 3V2Y Chain:A ((62-488)) | -------------------SIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLL-SG--ATTYKL-TPAQWFLREGSMFVALSASVFSL---LAIAIERYITMLK--------NNFRLFLLISACWVISLILGGL-P-IMGWNCI--SALSSCSTVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPL--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267017 for 1865 contacts (-143.2/contact) +
2D Compatibility (PS) -26936 + (NN) -9934 + (LL) 4356
1D Compatibility (HY) -20000 + (ID) 2300
Total energy: -321831.0 ( -172.56 by residue)
QMean score : 0.297
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