Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDPTISTLDTELTPINGTEETLCYKQTLSLTVLTCIVSLVGLTGNAVVLWLLGC-RMRRNAFSIYILNLAAADFLFLSGR-LIYSLLSFISI---PH-TISKILYPVMMFSYFAGLSFLSAVSTERCLSVLWPIWYRCHRPTHLSAVVCVLLWALSLLRSILEWMLCGFLFSGADSAWCQT------------SDFITVAWLIFLCVVLCGSSLVLLIRILCGSR--------------------KIPLTRLYVTILLTVLVFLLCGLPFGIQFFLFLWIHVDREVLFCHVHLVSIFLSALNSSANPIIYFFVGSFRQRQNR-QNLKLVLQRALQDASEVDEGGGQLPEEILELSGSRLEQ |
2Z73 Chain:A ((29-333)) | ---------------------VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFRE-AISQTFPWVLTCCQFDDKETEDDKDAETEIPAGE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256578 for 2153 contacts (-119.2/contact) +
2D Compatibility (PS) -26466 + (NN) -2104 + (LL) 1964
1D Compatibility (HY) -16000 + (ID) 2050
Total energy: -301234.0 ( -139.91 by residue)
QMean score : 0.243
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